Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 CLK3P2-201ENST00000427566 1453 ntBASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 AC023310.3-201ENST00000557027 670 ntBASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 AC100756.1-201ENST00000562736 682 ntBASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 AC138749.3-201ENST00000567691 622 ntBASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 AC138761.1-201ENST00000584393 385 ntBASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 AC000095.1-201ENST00000603208 874 ntBASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 AC116165.1-201ENST00000611806 668 ntBASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 AC023024.2-201ENST00000623561 1993 ntBASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 AC148477.4-201ENST00000613430 1793 ntBASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATG4BQ9Y4P1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 TERF1P3-201ENST00000505638 1227 ntBASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 TPRX2P-201ENST00000535362 881 ntBASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 LINC02560-201ENST00000596379 459 ntBASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 AC025181.2-201ENST00000606994 802 ntBASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 AC008761.3-201ENST00000624803 892 ntBASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATG4BQ9Y4P1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATG4BQ9Y4P1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATG4BQ9Y4P1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms