Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF11Q9Y3C5 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF11Q9Y3C5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 DNAJB3-202ENST00000449667 1266 ntBASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 AC069262.1-201ENST00000539058 672 ntBASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 AC126365.1-201ENST00000578585 1514 ntBASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RNF11Q9Y3C5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 CETN4P-206ENST00000642099 2168 ntBASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC148477.4-201ENST00000613430 1793 ntBASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC023024.2-201ENST00000623561 1993 ntBASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 KRT18P13-201ENST00000400056 1290 ntBASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AL080243.2-201ENST00000418783 582 ntBASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 HLA-J-203ENST00000494367 1087 ntBASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC041040.2-201ENST00000622926 2899 ntBASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC013726.1-201ENST00000563747 2285 ntBASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF11Q9Y3C5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms