Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 AL596442.2-201ENST00000610240 980 ntBASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 AC007967.4-201ENST00000614700 386 ntBASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.96□□□□□ -0.18
POLR1DQ9Y2S0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR1DQ9Y2S0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR1DQ9Y2S0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR1DQ9Y2S0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.96□□□□□ -0.18
POLR1DQ9Y2S0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR1DQ9Y2S0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
POLR1DQ9Y2S0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
POLR1DQ9Y2S0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.96□□□□□ -0.18
POLR1DQ9Y2S0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 KRT18P13-201ENST00000400056 1290 ntBASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 AC254562.1-201ENST00000417586 456 ntBASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 AC004967.1-201ENST00000453589 447 ntBASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 HNRNPUP1-201ENST00000554987 333 ntBASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 MIR4453-201ENST00000584019 89 ntBASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 AC138035.3-201ENST00000622706 2791 ntBASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 AC087386.2-201ENST00000623212 4637 ntBASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 AC023157.3-201ENST00000619086 2088 ntBASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR1DQ9Y2S0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms