Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 BOLA2P3-201ENST00000404566 256 ntBASIC16.35■□□□□ 0.21
CDH9Q9ULB4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 ATP5G2P4-201ENST00000442175 420 ntBASIC16.35■□□□□ 0.21
CDH9Q9ULB4 BCRP2-202ENST00000447763 634 ntBASIC16.35■□□□□ 0.21
CDH9Q9ULB4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 KRT18P25-201ENST00000508931 1278 ntBASIC16.35■□□□□ 0.21
CDH9Q9ULB4 BCRP6-201ENST00000510112 632 ntBASIC16.35■□□□□ 0.21
CDH9Q9ULB4 BCRP7-201ENST00000511549 544 ntBASIC16.35■□□□□ 0.21
CDH9Q9ULB4 IGHV3-71-201ENST00000523324 359 ntBASIC16.35■□□□□ 0.21
CDH9Q9ULB4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH9Q9ULB4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 AC104457.1-201ENST00000401024 814 ntBASIC16.34■□□□□ 0.21
CDH9Q9ULB4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 AC114812.1-204ENST00000449669 728 ntBASIC16.34■□□□□ 0.21
CDH9Q9ULB4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 AC017083.2-201ENST00000608069 979 ntBASIC16.34■□□□□ 0.21
CDH9Q9ULB4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 PRSS30P-206ENST00000641773 873 ntBASIC16.34■□□□□ 0.21
CDH9Q9ULB4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH9Q9ULB4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH9Q9ULB4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH9Q9ULB4 CICP6-201ENST00000457191 2729 ntBASIC16.33■□□□□ 0.21
CDH9Q9ULB4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH9Q9ULB4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms