Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 TOMM22P5-201ENST00000416399 439 ntBASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 AP001160.2-201ENST00000596071 487 ntBASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 WASH3P-207ENST00000560956 1394 ntBASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 ZBED1P1-201ENST00000502364 1930 ntBASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 AC087499.5-201ENST00000452760 1342 ntBASIC14.92□□□□□ -0.02
VPS29Q9UBQ0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 LINC01115-203ENST00000606068 577 ntBASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 AC023511.2-201ENST00000618803 211 ntBASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 AL109936.8-201ENST00000641772 604 ntBASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS29Q9UBQ0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms