Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 CICP13-201ENST00000422015 2789 ntBASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HCFC1R1Q9NWW0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 AC138028.6-201ENST00000616106 1482 ntBASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 PRAL-201ENST00000624952 3286 ntBASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 AL645937.2-201ENST00000396808 931 ntBASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 POM121L8P-201ENST00000417732 1281 ntBASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 POM121L9P-203ENST00000441984 1285 ntBASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 SCARNA20.5-201ENST00000516991 142 ntBASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 AP003171.2-201ENST00000528208 925 ntBASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 PPY2P-201ENST00000582808 702 ntBASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 AC073413.1-201ENST00000603927 732 ntBASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCFC1R1Q9NWW0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 BX284668.4-201ENST00000453917 508 ntBASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 AL391280.1-201ENST00000506969 1062 ntBASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 SAMD11P1-201ENST00000571429 661 ntBASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 AC020914.3-201ENST00000594712 304 ntBASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.97■□□□□ 0.15
HCFC1R1Q9NWW0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms