Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 TOMM22P5-201ENST00000416399 439 ntBASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 AC097493.3-201ENST00000509725 367 ntBASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 AC126755.1-201ENST00000525846 6405 ntBASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC40Q9H9A6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 LINC02228-204ENST00000642115 2962 ntBASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 AC100757.3-201ENST00000622361 1406 ntBASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 KRT18P28-201ENST00000453838 1332 ntBASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 TREML5P-201ENST00000421694 576 ntBASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 METTL21AP1-201ENST00000438852 635 ntBASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 KRT18P43-201ENST00000469825 1281 ntBASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 AL844908.2-201ENST00000609461 460 ntBASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC40Q9H9A6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC40Q9H9A6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms