Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.2■□□□□ 0.18
SMOQ99835 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.2■□□□□ 0.18
SMOQ99835 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 AC005229.1-201ENST00000392885 409 ntBASIC16.2■□□□□ 0.18
SMOQ99835 AC092933.1-201ENST00000393644 945 ntBASIC16.2■□□□□ 0.18
SMOQ99835 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SMOQ99835 GHSR-202ENST00000427970 912 ntBASIC16.2■□□□□ 0.18
SMOQ99835 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.2■□□□□ 0.18
SMOQ99835 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.2■□□□□ 0.18
SMOQ99835 ACA64.2-201ENST00000459014 129 ntBASIC16.2■□□□□ 0.18
SMOQ99835 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.2■□□□□ 0.18
SMOQ99835 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SMOQ99835 AL512343.1-201ENST00000605837 169 ntBASIC16.2■□□□□ 0.18
SMOQ99835 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.2■□□□□ 0.18
SMOQ99835 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.2■□□□□ 0.18
SMOQ99835 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMOQ99835 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SMOQ99835 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.19■□□□□ 0.18
SMOQ99835 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.19■□□□□ 0.18
SMOQ99835 AC148477.4-201ENST00000613430 1793 ntBASIC16.19■□□□□ 0.18
SMOQ99835 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.19■□□□□ 0.18
SMOQ99835 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.19■□□□□ 0.18
SMOQ99835 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.19■□□□□ 0.18
SMOQ99835 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.19■□□□□ 0.18
SMOQ99835 ARSEP1-201ENST00000420443 635 ntBASIC16.19■□□□□ 0.18
SMOQ99835 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.19■□□□□ 0.18
SMOQ99835 GPR53P-205ENST00000457298 1084 ntBASIC16.19■□□□□ 0.18
SMOQ99835 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.19■□□□□ 0.18
SMOQ99835 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.19■□□□□ 0.18
SMOQ99835 RAB43P1-201ENST00000561790 589 ntBASIC16.19■□□□□ 0.18
SMOQ99835 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.19■□□□□ 0.18
SMOQ99835 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.19■□□□□ 0.18
SMOQ99835 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SMOQ99835 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SMOQ99835 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SMOQ99835 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMOQ99835 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMOQ99835 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.18■□□□□ 0.18
SMOQ99835 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.18■□□□□ 0.18
SMOQ99835 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
SMOQ99835 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms