Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 ALK-205ENST00000618119 4646 ntTSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 CR383656.2-201ENST00000548656 2254 ntBASIC11.85□□□□□ -0.51
AP1S3Q96PC3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 SCARNA2-201ENST00000458748 420 ntBASIC11.85□□□□□ -0.51
AP1S3Q96PC3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 MTDHP3-201ENST00000594186 672 ntBASIC11.85□□□□□ -0.51
AP1S3Q96PC3 MTDHP4-201ENST00000600287 670 ntBASIC11.85□□□□□ -0.51
AP1S3Q96PC3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AP1S3Q96PC3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 HAUS4P1-201ENST00000406739 1145 ntBASIC11.84□□□□□ -0.51
AP1S3Q96PC3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
AP1S3Q96PC3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms