Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 AL365330.1-201ENST00000607459 531 ntBASIC13.86□□□□□ -0.19
RFT1Q96AA3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 AC140479.7-201ENST00000636301 2332 ntBASIC13.86□□□□□ -0.19
RFT1Q96AA3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RFT1Q96AA3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RFT1Q96AA3 AC079781.5-202ENST00000641784 3743 ntBASIC13.86□□□□□ -0.19
RFT1Q96AA3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 WASH6P-202ENST00000359512 1437 ntBASIC13.85□□□□□ -0.19
RFT1Q96AA3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
RFT1Q96AA3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RFT1Q96AA3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 TPM4P1-201ENST00000436100 807 ntBASIC13.84□□□□□ -0.19
RFT1Q96AA3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 RPL13AP23-201ENST00000480739 586 ntBASIC13.84□□□□□ -0.19
RFT1Q96AA3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 AC002347.1-201ENST00000569543 541 ntBASIC13.84□□□□□ -0.19
RFT1Q96AA3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 AC068137.2-201ENST00000605408 478 ntBASIC13.84□□□□□ -0.19
RFT1Q96AA3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms