Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 DRD5P1-201ENST00000456605 1438 ntBASIC13.65□□□□□ -0.22
TMEM54Q969K7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 ZBED1P1-201ENST00000502364 1930 ntBASIC13.65□□□□□ -0.22
TMEM54Q969K7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 SAMD11P1-201ENST00000571429 661 ntBASIC13.65□□□□□ -0.22
TMEM54Q969K7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 BRI3BPP1-201ENST00000594224 787 ntBASIC13.65□□□□□ -0.22
TMEM54Q969K7 LINC02560-201ENST00000596379 459 ntBASIC13.65□□□□□ -0.22
TMEM54Q969K7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 AC012508.2-201ENST00000567613 1472 ntBASIC13.65□□□□□ -0.22
TMEM54Q969K7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 LINC00554-201ENST00000564841 3011 ntBASIC13.65□□□□□ -0.22
TMEM54Q969K7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TMEM54Q969K7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.65□□□□□ -0.22
TMEM54Q969K7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM54Q969K7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 AL391825.1-201ENST00000457671 1364 ntBASIC13.64□□□□□ -0.23
TMEM54Q969K7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM54Q969K7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms