Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 RNA5SP416-201ENST00000516838 111 ntBASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SLC25A1P1-201ENST00000528351 927 ntBASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AC120114.3-201ENST00000611923 658 ntBASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AC092865.6-201ENST00000642101 219 ntBASIC13.54□□□□□ -0.24
CCDC107Q8WV48 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 KRT8P44-201ENST00000441609 1350 ntBASIC13.54□□□□□ -0.24
CCDC107Q8WV48 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AL589702.1-201ENST00000641229 1509 ntBASIC13.54□□□□□ -0.24
CCDC107Q8WV48 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 PDPK2P-202ENST00000562415 1191 ntBASIC13.53□□□□□ -0.24
CCDC107Q8WV48 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 AL365330.1-201ENST00000607459 531 ntBASIC13.53□□□□□ -0.24
CCDC107Q8WV48 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 AC092127.1-201ENST00000567093 3455 ntBASIC13.53□□□□□ -0.24
CCDC107Q8WV48 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 DMBT1P1-203ENST00000636837 4628 ntBASIC13.53□□□□□ -0.24
CCDC107Q8WV48 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms