Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 AHCYP2-201ENST00000430630 1300 ntBASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 AL162727.3-201ENST00000635661 2787 ntBASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 EEF1DP4-201ENST00000446006 880 ntBASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 MIR3619-201ENST00000579667 83 ntBASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
U2AF1L4Q8WU68 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
U2AF1L4Q8WU68 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
U2AF1L4Q8WU68 PCGF3-213ENST00000620529 1899 ntBASIC17.77■□□□□ 0.43
U2AF1L4Q8WU68 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
U2AF1L4Q8WU68 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
U2AF1L4Q8WU68 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
U2AF1L4Q8WU68 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
U2AF1L4Q8WU68 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
U2AF1L4Q8WU68 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 AC004987.2-201ENST00000395959 1148 ntBASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 TMEM198B-204ENST00000484016 896 ntBASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 CHMP4BP1-201ENST00000556017 588 ntBASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 MIR5572-201ENST00000583188 137 ntBASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 AC138627.1-207ENST00000641560 1006 ntBASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 AL365203.3-201ENST00000609742 2057 ntBASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
U2AF1L4Q8WU68 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms