Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 REXO1L1P-202ENST00000608646 1974 ntBASIC13.01□□□□□ -0.33
COMMD1Q8N668 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 TSEN15P1-201ENST00000423257 515 ntBASIC13.01□□□□□ -0.33
COMMD1Q8N668 AC079140.1-201ENST00000508039 487 ntBASIC13.01□□□□□ -0.33
COMMD1Q8N668 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 AC009090.5-201ENST00000624886 2285 ntBASIC13.01□□□□□ -0.33
COMMD1Q8N668 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 AC006504.5-208ENST00000588784 2401 ntBASIC13.01□□□□□ -0.33
COMMD1Q8N668 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
COMMD1Q8N668 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.01□□□□□ -0.33
COMMD1Q8N668 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
COMMD1Q8N668 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD1Q8N668 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
COMMD1Q8N668 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
COMMD1Q8N668 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
COMMD1Q8N668 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD1Q8N668 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD1Q8N668 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13□□□□□ -0.33
COMMD1Q8N668 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13□□□□□ -0.33
COMMD1Q8N668 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13□□□□□ -0.33
COMMD1Q8N668 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD1Q8N668 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD1Q8N668 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COMMD1Q8N668 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
COMMD1Q8N668 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
COMMD1Q8N668 KRT8P39-201ENST00000396270 1433 ntBASIC13□□□□□ -0.33
COMMD1Q8N668 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
COMMD1Q8N668 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13□□□□□ -0.33
COMMD1Q8N668 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13□□□□□ -0.33
COMMD1Q8N668 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13□□□□□ -0.33
COMMD1Q8N668 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms