Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 TOMM22P5-201ENST00000416399 439 ntBASIC16.91■□□□□ 0.3
VPS52Q8N1B4 KRT18P64-201ENST00000434946 1219 ntBASIC16.91■□□□□ 0.3
VPS52Q8N1B4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 AL365203.3-201ENST00000609742 2057 ntBASIC16.91■□□□□ 0.3
VPS52Q8N1B4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS52Q8N1B4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 AC023824.1-201ENST00000562945 2975 ntBASIC16.9■□□□□ 0.3
VPS52Q8N1B4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 AC134915.1-201ENST00000426461 574 ntBASIC16.9■□□□□ 0.3
VPS52Q8N1B4 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 AC093525.8-201ENST00000624099 1342 ntBASIC16.9■□□□□ 0.3
VPS52Q8N1B4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 AC024909.3-201ENST00000611513 2257 ntBASIC16.9■□□□□ 0.3
VPS52Q8N1B4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS52Q8N1B4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 BCRP2-202ENST00000447763 634 ntBASIC16.89■□□□□ 0.29
VPS52Q8N1B4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 BCRP6-201ENST00000510112 632 ntBASIC16.89■□□□□ 0.29
VPS52Q8N1B4 BCRP7-201ENST00000511549 544 ntBASIC16.89■□□□□ 0.29
VPS52Q8N1B4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.89■□□□□ 0.29
VPS52Q8N1B4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms