Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 ACTBP8-201ENST00000403258 1108 ntBASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 AC004066.1-201ENST00000502488 802 ntBASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 PRSS30P-206ENST00000641773 873 ntBASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC60Q8IWA6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 RPL5P21-201ENST00000404620 815 ntBASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 SAMD11P1-201ENST00000571429 661 ntBASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 AL033527.4-201ENST00000641026 673 ntBASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 CICP11-201ENST00000434745 2827 ntBASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC60Q8IWA6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 AC020658.6-201ENST00000623564 1870 ntBASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CCDC60Q8IWA6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms