Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 AC005695.3-201ENST00000614522 232 ntBASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTC1Q2NKJ3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 AL662890.1-201ENST00000396818 632 ntBASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 AP006547.1-201ENST00000563435 692 ntBASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 AC013268.4-201ENST00000637413 2228 ntBASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 AC022532.1-201ENST00000624563 1728 ntBASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTC1Q2NKJ3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTC1Q2NKJ3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CTC1Q2NKJ3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.58■□□□□ 0.25
CTC1Q2NKJ3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 FXNP2-201ENST00000411625 547 ntBASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 AC005077.2-201ENST00000449786 690 ntBASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 AC026410.3-201ENST00000514280 936 ntBASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 BNIP3P1-202ENST00000550043 1585 ntBASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTC1Q2NKJ3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 AC073347.1-201ENST00000421633 2643 ntBASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms