Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.06■□□□□ 0.32
KCNA1Q09470 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KCNA1Q09470 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KCNA1Q09470 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
KCNA1Q09470 AC148477.4-201ENST00000613430 1793 ntBASIC17.06■□□□□ 0.32
KCNA1Q09470 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.06■□□□□ 0.32
KCNA1Q09470 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KCNA1Q09470 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.06■□□□□ 0.32
KCNA1Q09470 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KCNA1Q09470 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
KCNA1Q09470 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
KCNA1Q09470 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.05■□□□□ 0.32
KCNA1Q09470 FLJ16779-201ENST00000612722 7638 ntBASIC17.05■□□□□ 0.32
KCNA1Q09470 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.05■□□□□ 0.32
KCNA1Q09470 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNA1Q09470 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNA1Q09470 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNA1Q09470 DFFBP1-201ENST00000433250 979 ntBASIC17.05■□□□□ 0.32
KCNA1Q09470 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNA1Q09470 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.05■□□□□ 0.32
KCNA1Q09470 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.05■□□□□ 0.32
KCNA1Q09470 AC055876.2-201ENST00000531834 546 ntBASIC17.05■□□□□ 0.32
KCNA1Q09470 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNA1Q09470 AC190387.1-201ENST00000551683 408 ntBASIC17.05■□□□□ 0.32
KCNA1Q09470 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNA1Q09470 AC092364.2-202ENST00000597012 1073 ntBASIC17.05■□□□□ 0.32
KCNA1Q09470 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNA1Q09470 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
KCNA1Q09470 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNA1Q09470 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 AC126365.1-201ENST00000578585 1514 ntBASIC17.05■□□□□ 0.32
KCNA1Q09470 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNA1Q09470 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
KCNA1Q09470 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
KCNA1Q09470 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.04■□□□□ 0.32
KCNA1Q09470 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.04■□□□□ 0.32
KCNA1Q09470 AC036164.1-201ENST00000570544 333 ntBASIC17.04■□□□□ 0.32
KCNA1Q09470 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNA1Q09470 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNA1Q09470 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNA1Q09470 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KCNA1Q09470 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNA1Q09470 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNA1Q09470 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNA1Q09470 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNA1Q09470 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KCNA1Q09470 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
KCNA1Q09470 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.03■□□□□ 0.32
KCNA1Q09470 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KCNA1Q09470 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.03■□□□□ 0.32
KCNA1Q09470 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
KCNA1Q09470 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNA1Q09470 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNA1Q09470 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
KCNA1Q09470 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.03■□□□□ 0.32
KCNA1Q09470 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNA1Q09470 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNA1Q09470 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.03■□□□□ 0.32
KCNA1Q09470 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNA1Q09470 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
KCNA1Q09470 GAPDHP40-201ENST00000505218 1006 ntBASIC17.03■□□□□ 0.32
KCNA1Q09470 TERF1P3-201ENST00000505638 1227 ntBASIC17.03■□□□□ 0.32
KCNA1Q09470 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.03■□□□□ 0.32
KCNA1Q09470 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.03■□□□□ 0.32
KCNA1Q09470 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KCNA1Q09470 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.03■□□□□ 0.32
KCNA1Q09470 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.03■□□□□ 0.32
KCNA1Q09470 AC138761.1-201ENST00000584393 385 ntBASIC17.03■□□□□ 0.32
KCNA1Q09470 AC099568.2-201ENST00000609194 695 ntBASIC17.03■□□□□ 0.32
KCNA1Q09470 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.03■□□□□ 0.32
KCNA1Q09470 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms