Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 AL353732.1-201ENST00000569618 1459 ntBASIC11.02□□□□□ -0.65
CKS1BP61024 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
CKS1BP61024 MIR648-201ENST00000385046 94 ntBASIC11.02□□□□□ -0.65
CKS1BP61024 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.02□□□□□ -0.65
CKS1BP61024 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.02□□□□□ -0.65
CKS1BP61024 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.02□□□□□ -0.65
CKS1BP61024 AC087641.1-201ENST00000557561 1021 ntBASIC11.02□□□□□ -0.65
CKS1BP61024 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS1BP61024 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.02□□□□□ -0.65
CKS1BP61024 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.02□□□□□ -0.65
CKS1BP61024 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS1BP61024 CYP2A7P1-201ENST00000595391 815 ntBASIC11.02□□□□□ -0.65
CKS1BP61024 AC138894.3-201ENST00000603787 634 ntBASIC11.02□□□□□ -0.65
CKS1BP61024 AC069148.1-201ENST00000608741 768 ntBASIC11.02□□□□□ -0.65
CKS1BP61024 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.02□□□□□ -0.65
CKS1BP61024 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS1BP61024 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
CKS1BP61024 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS1BP61024 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.02□□□□□ -0.65
CKS1BP61024 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
CKS1BP61024 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
CKS1BP61024 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 AC018442.1-201ENST00000421439 2061 ntBASIC11.02□□□□□ -0.65
CKS1BP61024 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
CKS1BP61024 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.02□□□□□ -0.65
CKS1BP61024 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 LINC02447-202ENST00000501888 2146 ntBASIC11.02□□□□□ -0.65
CKS1BP61024 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS1BP61024 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.02□□□□□ -0.65
CKS1BP61024 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 AC145098.2-201ENST00000623593 3026 ntBASIC11.01□□□□□ -0.65
CKS1BP61024 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CKS1BP61024 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS1BP61024 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CKS1BP61024 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CKS1BP61024 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.01□□□□□ -0.65
CKS1BP61024 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.01□□□□□ -0.65
CKS1BP61024 RBM17P3-201ENST00000417687 1192 ntBASIC11.01□□□□□ -0.65
CKS1BP61024 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.01□□□□□ -0.65
CKS1BP61024 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.01□□□□□ -0.65
CKS1BP61024 AC132008.2-207ENST00000454517 770 ntBASIC11.01□□□□□ -0.65
CKS1BP61024 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 AC087163.2-201ENST00000457299 853 ntBASIC11.01□□□□□ -0.65
CKS1BP61024 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.01□□□□□ -0.65
CKS1BP61024 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.01□□□□□ -0.65
CKS1BP61024 MIR4492-201ENST00000581627 80 ntBASIC11.01□□□□□ -0.65
CKS1BP61024 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS1BP61024 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS1BP61024 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.01□□□□□ -0.65
CKS1BP61024 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CKS1BP61024 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 766.6 ms