Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
AP1S2P56377 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
AP1S2P56377 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.15■□□□□ 0.02
AP1S2P56377 GHSR-202ENST00000427970 912 ntBASIC15.15■□□□□ 0.02
AP1S2P56377 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S2P56377 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.15■□□□□ 0.02
AP1S2P56377 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.15■□□□□ 0.02
AP1S2P56377 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
AP1S2P56377 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.15■□□□□ 0.02
AP1S2P56377 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
AP1S2P56377 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.15■□□□□ 0.02
AP1S2P56377 AC008738.7-201ENST00000609744 511 ntBASIC15.15■□□□□ 0.02
AP1S2P56377 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
AP1S2P56377 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
AP1S2P56377 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S2P56377 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 AC144831.1-201ENST00000573312 2656 ntBASIC15.15■□□□□ 0.02
AP1S2P56377 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
AP1S2P56377 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.15■□□□□ 0.02
AP1S2P56377 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP1S2P56377 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AP1S2P56377 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.14■□□□□ 0.01
AP1S2P56377 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
AP1S2P56377 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
AP1S2P56377 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.14■□□□□ 0.01
AP1S2P56377 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.14■□□□□ 0.01
AP1S2P56377 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.14■□□□□ 0.01
AP1S2P56377 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.14■□□□□ 0.01
AP1S2P56377 AC093214.1-201ENST00000511688 1107 ntBASIC15.14■□□□□ 0.01
AP1S2P56377 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 RNA5SP421-201ENST00000516864 134 ntBASIC15.14■□□□□ 0.01
AP1S2P56377 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.14■□□□□ 0.01
AP1S2P56377 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S2P56377 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.14■□□□□ 0.01
AP1S2P56377 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.14■□□□□ 0.01
AP1S2P56377 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S2P56377 SRD5A3P1-201ENST00000603021 949 ntBASIC15.14■□□□□ 0.01
AP1S2P56377 AC025181.2-201ENST00000606994 802 ntBASIC15.14■□□□□ 0.01
AP1S2P56377 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S2P56377 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.14■□□□□ 0.01
AP1S2P56377 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
AP1S2P56377 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S2P56377 MROH4P-201ENST00000431302 1578 ntBASIC15.14■□□□□ 0.01
AP1S2P56377 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.14■□□□□ 0.01
AP1S2P56377 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.14■□□□□ 0.01
AP1S2P56377 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
AP1S2P56377 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP1S2P56377 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
AP1S2P56377 MIR600HG-201ENST00000449175 5984 ntBASIC15.14■□□□□ 0.01
AP1S2P56377 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S2P56377 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
AP1S2P56377 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S2P56377 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP1S2P56377 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.13■□□□□ 0.01
AP1S2P56377 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.13■□□□□ 0.01
AP1S2P56377 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.13■□□□□ 0.01
AP1S2P56377 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.13■□□□□ 0.01
AP1S2P56377 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms