Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PSMD4P55036 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PSMD4P55036 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PSMD4P55036 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PSMD4P55036 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PSMD4P55036 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PSMD4P55036 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
PSMD4P55036 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.53□□□□□ -0.08
PSMD4P55036 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.53□□□□□ -0.08
PSMD4P55036 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.53□□□□□ -0.08
PSMD4P55036 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 AC099063.4-201ENST00000641099 1602 ntBASIC14.53□□□□□ -0.08
PSMD4P55036 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.53□□□□□ -0.08
PSMD4P55036 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.53□□□□□ -0.08
PSMD4P55036 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.53□□□□□ -0.08
PSMD4P55036 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.53□□□□□ -0.08
PSMD4P55036 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.53□□□□□ -0.08
PSMD4P55036 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PSMD4P55036 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.53□□□□□ -0.08
PSMD4P55036 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.53□□□□□ -0.08
PSMD4P55036 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.53□□□□□ -0.08
PSMD4P55036 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.53□□□□□ -0.08
PSMD4P55036 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.53□□□□□ -0.08
PSMD4P55036 AL109936.8-201ENST00000641772 604 ntBASIC14.53□□□□□ -0.08
PSMD4P55036 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PSMD4P55036 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PSMD4P55036 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PSMD4P55036 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PSMD4P55036 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PSMD4P55036 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PSMD4P55036 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.52□□□□□ -0.08
PSMD4P55036 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.52□□□□□ -0.08
PSMD4P55036 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.52□□□□□ -0.08
PSMD4P55036 AC022144.1-201ENST00000602255 1580 ntBASIC14.52□□□□□ -0.08
PSMD4P55036 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PSMD4P55036 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
PSMD4P55036 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PSMD4P55036 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PSMD4P55036 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PSMD4P55036 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PSMD4P55036 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.52□□□□□ -0.08
PSMD4P55036 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PSMD4P55036 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.52□□□□□ -0.09
PSMD4P55036 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 RPL5P21-201ENST00000404620 815 ntBASIC14.52□□□□□ -0.09
PSMD4P55036 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.52□□□□□ -0.09
PSMD4P55036 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.52□□□□□ -0.09
PSMD4P55036 AC015922.1-201ENST00000421102 1152 ntBASIC14.52□□□□□ -0.09
PSMD4P55036 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.52□□□□□ -0.09
PSMD4P55036 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.52□□□□□ -0.09
PSMD4P55036 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.52□□□□□ -0.09
PSMD4P55036 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.52□□□□□ -0.09
PSMD4P55036 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.52□□□□□ -0.09
PSMD4P55036 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.52□□□□□ -0.09
PSMD4P55036 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.52□□□□□ -0.09
PSMD4P55036 AL844908.2-201ENST00000609461 460 ntBASIC14.52□□□□□ -0.09
PSMD4P55036 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.52□□□□□ -0.09
PSMD4P55036 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.52□□□□□ -0.09
PSMD4P55036 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.52□□□□□ -0.09
PSMD4P55036 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
PSMD4P55036 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PSMD4P55036 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PSMD4P55036 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PSMD4P55036 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PSMD4P55036 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PSMD4P55036 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms