Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAD23BP54727 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAD23BP54727 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RAD23BP54727 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 AC084364.1-201ENST00000551967 1556 ntBASIC16.64■□□□□ 0.25
RAD23BP54727 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.64■□□□□ 0.25
RAD23BP54727 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAD23BP54727 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RAD23BP54727 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.64■□□□□ 0.25
RAD23BP54727 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD23BP54727 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.64■□□□□ 0.25
RAD23BP54727 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD23BP54727 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD23BP54727 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.64■□□□□ 0.25
RAD23BP54727 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD23BP54727 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD23BP54727 AC000095.1-201ENST00000603208 874 ntBASIC16.64■□□□□ 0.25
RAD23BP54727 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.64■□□□□ 0.25
RAD23BP54727 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.64■□□□□ 0.25
RAD23BP54727 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
RAD23BP54727 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.64■□□□□ 0.25
RAD23BP54727 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.64■□□□□ 0.25
RAD23BP54727 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAD23BP54727 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.64■□□□□ 0.25
RAD23BP54727 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAD23BP54727 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.64■□□□□ 0.25
RAD23BP54727 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RAD23BP54727 SLC7A15P-201ENST00000424028 1363 ntBASIC16.64■□□□□ 0.25
RAD23BP54727 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD23BP54727 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
RAD23BP54727 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD23BP54727 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD23BP54727 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.63■□□□□ 0.25
RAD23BP54727 AC093004.1-201ENST00000508850 424 ntBASIC16.63■□□□□ 0.25
RAD23BP54727 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.63■□□□□ 0.25
RAD23BP54727 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.63■□□□□ 0.25
RAD23BP54727 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD23BP54727 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.63■□□□□ 0.25
RAD23BP54727 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RAD23BP54727 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD23BP54727 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAD23BP54727 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.63■□□□□ 0.25
RAD23BP54727 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.63■□□□□ 0.25
RAD23BP54727 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAD23BP54727 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAD23BP54727 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.62■□□□□ 0.25
RAD23BP54727 AC112693.3-201ENST00000624819 1983 ntBASIC16.62■□□□□ 0.25
RAD23BP54727 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
RAD23BP54727 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD23BP54727 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD23BP54727 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.62■□□□□ 0.25
RAD23BP54727 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.62■□□□□ 0.25
RAD23BP54727 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAD23BP54727 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.62■□□□□ 0.25
RAD23BP54727 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAD23BP54727 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.62■□□□□ 0.25
RAD23BP54727 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms