Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RAB5CP51148 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 AC015802.1-201ENST00000588104 1449 ntBASIC12.56□□□□□ -0.4
RAB5CP51148 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
RAB5CP51148 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 MIR718-201ENST00000390190 70 ntBASIC12.56□□□□□ -0.4
RAB5CP51148 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.56□□□□□ -0.4
RAB5CP51148 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 HOMER2P1-201ENST00000455653 964 ntBASIC12.56□□□□□ -0.4
RAB5CP51148 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB5CP51148 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.56□□□□□ -0.4
RAB5CP51148 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.56□□□□□ -0.4
RAB5CP51148 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB5CP51148 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
RAB5CP51148 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB5CP51148 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB5CP51148 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RAB5CP51148 LINC01568-207ENST00000641790 1380 ntBASIC12.56□□□□□ -0.4
RAB5CP51148 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB5CP51148 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RAB5CP51148 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RAB5CP51148 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RAB5CP51148 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RAB5CP51148 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RAB5CP51148 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB5CP51148 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
RAB5CP51148 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RAB5CP51148 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.55□□□□□ -0.4
RAB5CP51148 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 RPL5P21-201ENST00000404620 815 ntBASIC12.55□□□□□ -0.4
RAB5CP51148 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 AC107918.2-201ENST00000530817 355 ntBASIC12.55□□□□□ -0.4
RAB5CP51148 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.55□□□□□ -0.4
RAB5CP51148 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.55□□□□□ -0.4
RAB5CP51148 MIR4313-201ENST00000580760 101 ntBASIC12.55□□□□□ -0.4
RAB5CP51148 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.55□□□□□ -0.4
RAB5CP51148 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB5CP51148 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB5CP51148 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.55□□□□□ -0.4
RAB5CP51148 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB5CP51148 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RAB5CP51148 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5CP51148 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms