Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.72□□□□□ -0.05
CLK1P49759 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.72□□□□□ -0.05
CLK1P49759 KRT18P13-201ENST00000400056 1290 ntBASIC14.72□□□□□ -0.05
CLK1P49759 AC211486.1-202ENST00000416371 468 ntBASIC14.72□□□□□ -0.05
CLK1P49759 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.72□□□□□ -0.05
CLK1P49759 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.72□□□□□ -0.05
CLK1P49759 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.72□□□□□ -0.05
CLK1P49759 AC211476.1-201ENST00000503899 468 ntBASIC14.72□□□□□ -0.05
CLK1P49759 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CLK1P49759 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.72□□□□□ -0.05
CLK1P49759 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.72□□□□□ -0.05
CLK1P49759 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
CLK1P49759 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.72□□□□□ -0.05
CLK1P49759 AP000842.3-202ENST00000569238 1080 ntBASIC14.72□□□□□ -0.05
CLK1P49759 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.72□□□□□ -0.05
CLK1P49759 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.72□□□□□ -0.05
CLK1P49759 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.72□□□□□ -0.05
CLK1P49759 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CLK1P49759 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CLK1P49759 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
CLK1P49759 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.72□□□□□ -0.05
CLK1P49759 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.72□□□□□ -0.05
CLK1P49759 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLK1P49759 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CLK1P49759 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.71□□□□□ -0.05
CLK1P49759 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.71□□□□□ -0.05
CLK1P49759 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.71□□□□□ -0.05
CLK1P49759 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.71□□□□□ -0.05
CLK1P49759 AC254562.1-201ENST00000417586 456 ntBASIC14.71□□□□□ -0.05
CLK1P49759 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
CLK1P49759 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.71□□□□□ -0.05
CLK1P49759 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.71□□□□□ -0.05
CLK1P49759 AC022145.2-201ENST00000598203 171 ntBASIC14.71□□□□□ -0.05
CLK1P49759 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.71□□□□□ -0.05
CLK1P49759 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CLK1P49759 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CLK1P49759 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.71□□□□□ -0.05
CLK1P49759 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.71□□□□□ -0.05
CLK1P49759 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CLK1P49759 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLK1P49759 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLK1P49759 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CLK1P49759 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
CLK1P49759 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CLK1P49759 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.71□□□□□ -0.06
CLK1P49759 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CLK1P49759 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLK1P49759 AC007191.1-201ENST00000623179 2995 ntBASIC14.7□□□□□ -0.06
CLK1P49759 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLK1P49759 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLK1P49759 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLK1P49759 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.7□□□□□ -0.06
CLK1P49759 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.7□□□□□ -0.06
CLK1P49759 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLK1P49759 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLK1P49759 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.7□□□□□ -0.06
CLK1P49759 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLK1P49759 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLK1P49759 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms