Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 SNORD3B-2-202ENST00000571722 791 ntBASIC17.13■□□□□ 0.33
CENPFP49454 AC073911.3-201ENST00000624401 631 ntBASIC17.13■□□□□ 0.33
CENPFP49454 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 AC010141.1-201ENST00000411585 623 ntBASIC17.13■□□□□ 0.33
CENPFP49454 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.13■□□□□ 0.33
CENPFP49454 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CENPFP49454 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.13■□□□□ 0.33
CENPFP49454 AL357563.1-201ENST00000404728 395 ntBASIC17.13■□□□□ 0.33
CENPFP49454 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CENPFP49454 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.13■□□□□ 0.33
CENPFP49454 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.13■□□□□ 0.33
CENPFP49454 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.13■□□□□ 0.33
CENPFP49454 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CENPFP49454 AC025262.2-201ENST00000623975 1056 ntBASIC17.13■□□□□ 0.33
CENPFP49454 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.13■□□□□ 0.33
CENPFP49454 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CENPFP49454 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CENPFP49454 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.12■□□□□ 0.33
CENPFP49454 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.12■□□□□ 0.33
CENPFP49454 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.12■□□□□ 0.33
CENPFP49454 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.12■□□□□ 0.33
CENPFP49454 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CENPFP49454 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CENPFP49454 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CENPFP49454 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.12■□□□□ 0.33
CENPFP49454 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CENPFP49454 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.12■□□□□ 0.33
CENPFP49454 AC011477.6-201ENST00000604980 1927 ntBASIC17.12■□□□□ 0.33
CENPFP49454 AC092850.2-201ENST00000623821 2697 ntBASIC17.12■□□□□ 0.33
CENPFP49454 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.12■□□□□ 0.33
CENPFP49454 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.12■□□□□ 0.33
CENPFP49454 AC138466.4-201ENST00000623965 852 ntBASIC17.12■□□□□ 0.33
CENPFP49454 KRT8P21-201ENST00000430398 1491 ntBASIC17.12■□□□□ 0.33
CENPFP49454 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CENPFP49454 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.12■□□□□ 0.33
CENPFP49454 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CENPFP49454 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CENPFP49454 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.11■□□□□ 0.33
CENPFP49454 RPL18AP3-201ENST00000462885 528 ntBASIC17.11■□□□□ 0.33
CENPFP49454 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.11■□□□□ 0.33
CENPFP49454 DNM1P51-201ENST00000558149 522 ntBASIC17.11■□□□□ 0.33
CENPFP49454 AL031713.1-201ENST00000564813 661 ntBASIC17.11■□□□□ 0.33
CENPFP49454 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CENPFP49454 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CENPFP49454 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.11■□□□□ 0.33
CENPFP49454 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.11■□□□□ 0.33
CENPFP49454 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.11■□□□□ 0.33
CENPFP49454 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CENPFP49454 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.11■□□□□ 0.33
CENPFP49454 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.11■□□□□ 0.33
CENPFP49454 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CENPFP49454 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms