Protein–RNA interactions for Protein: P47992

XCL1, Lymphotactin, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1P47992 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
XCL1P47992 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
XCL1P47992 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
XCL1P47992 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
XCL1P47992 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
XCL1P47992 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC10.77□□□□□ -0.68
XCL1P47992 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
XCL1P47992 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC10.77□□□□□ -0.68
XCL1P47992 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
XCL1P47992 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
XCL1P47992 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
XCL1P47992 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC10.77□□□□□ -0.68
XCL1P47992 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
XCL1P47992 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
XCL1P47992 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
XCL1P47992 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
XCL1P47992 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.68
XCL1P47992 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
XCL1P47992 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 AC091951.1-201ENST00000512854 2465 ntBASIC10.77□□□□□ -0.69
XCL1P47992 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC10.77□□□□□ -0.69
XCL1P47992 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.77□□□□□ -0.69
XCL1P47992 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC10.77□□□□□ -0.69
XCL1P47992 AL009178.2-201ENST00000597278 2719 ntBASIC10.77□□□□□ -0.69
XCL1P47992 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.77□□□□□ -0.69
XCL1P47992 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC10.77□□□□□ -0.69
XCL1P47992 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
XCL1P47992 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 MIR940-201ENST00000401276 94 ntBASIC10.77□□□□□ -0.69
XCL1P47992 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.77□□□□□ -0.69
XCL1P47992 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
XCL1P47992 SPDYE11-202ENST00000450699 704 ntBASIC10.77□□□□□ -0.69
XCL1P47992 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.77□□□□□ -0.69
XCL1P47992 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.77□□□□□ -0.69
XCL1P47992 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 SLC25A1P1-201ENST00000528351 927 ntBASIC10.77□□□□□ -0.69
XCL1P47992 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 SPDYE9P-201ENST00000570642 692 ntBASIC10.77□□□□□ -0.69
XCL1P47992 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 SPDYE10P-202ENST00000612005 668 ntBASIC10.77□□□□□ -0.69
XCL1P47992 SPDYE8P-202ENST00000612377 668 ntBASIC10.77□□□□□ -0.69
XCL1P47992 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC10.77□□□□□ -0.69
XCL1P47992 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
XCL1P47992 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC10.77□□□□□ -0.69
XCL1P47992 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.77□□□□□ -0.69
XCL1P47992 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
XCL1P47992 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
XCL1P47992 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
XCL1P47992 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
XCL1P47992 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 AC127383.1-201ENST00000444697 1800 ntBASIC10.77□□□□□ -0.69
XCL1P47992 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
XCL1P47992 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
XCL1P47992 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.76□□□□□ -0.69
XCL1P47992 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
XCL1P47992 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
XCL1P47992 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC10.76□□□□□ -0.69
XCL1P47992 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
XCL1P47992 MIR193BHG-211ENST00000641433 5365 ntBASIC10.76□□□□□ -0.69
XCL1P47992 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.76□□□□□ -0.69
XCL1P47992 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.76□□□□□ -0.69
XCL1P47992 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.76□□□□□ -0.69
XCL1P47992 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
XCL1P47992 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.76□□□□□ -0.69
XCL1P47992 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.76□□□□□ -0.69
XCL1P47992 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
XCL1P47992 AC023274.1-201ENST00000418278 595 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms