Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL15A1P39059 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.44■□□□□ 0.7
COL15A1P39059 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.44■□□□□ 0.7
COL15A1P39059 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL15A1P39059 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
COL15A1P39059 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL15A1P39059 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 CYP46A4P-201ENST00000414953 267 ntBASIC19.44■□□□□ 0.7
COL15A1P39059 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
COL15A1P39059 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 SPTLC1P5-201ENST00000450718 252 ntBASIC19.44■□□□□ 0.7
COL15A1P39059 IMP3P2-201ENST00000489760 475 ntBASIC19.44■□□□□ 0.7
COL15A1P39059 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.44■□□□□ 0.7
COL15A1P39059 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.44■□□□□ 0.7
COL15A1P39059 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.44■□□□□ 0.7
COL15A1P39059 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
COL15A1P39059 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC19.44■□□□□ 0.7
COL15A1P39059 AC097724.1-201ENST00000609581 426 ntBASIC19.44■□□□□ 0.7
COL15A1P39059 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.44■□□□□ 0.7
COL15A1P39059 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 AC084364.1-201ENST00000551967 1556 ntBASIC19.43■□□□□ 0.7
COL15A1P39059 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.43■□□□□ 0.7
COL15A1P39059 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.43■□□□□ 0.7
COL15A1P39059 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
COL15A1P39059 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COL15A1P39059 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.43■□□□□ 0.7
COL15A1P39059 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.43■□□□□ 0.7
COL15A1P39059 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 AC104457.1-201ENST00000401024 814 ntBASIC19.43■□□□□ 0.7
COL15A1P39059 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.43■□□□□ 0.7
COL15A1P39059 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.43■□□□□ 0.7
COL15A1P39059 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.43■□□□□ 0.7
COL15A1P39059 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.43■□□□□ 0.7
COL15A1P39059 AP001505.2-201ENST00000616815 443 ntBASIC19.43■□□□□ 0.7
COL15A1P39059 AP001002.3-201ENST00000623482 206 ntBASIC19.43■□□□□ 0.7
COL15A1P39059 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL15A1P39059 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL15A1P39059 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
COL15A1P39059 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
COL15A1P39059 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL15A1P39059 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COL15A1P39059 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
COL15A1P39059 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COL15A1P39059 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.42■□□□□ 0.7
COL15A1P39059 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COL15A1P39059 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 FXNP2-201ENST00000411625 547 ntBASIC19.42■□□□□ 0.7
COL15A1P39059 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.42■□□□□ 0.7
COL15A1P39059 AL354877.1-201ENST00000424412 413 ntBASIC19.42■□□□□ 0.7
COL15A1P39059 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.42■□□□□ 0.7
COL15A1P39059 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.42■□□□□ 0.7
COL15A1P39059 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.42■□□□□ 0.7
COL15A1P39059 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.42■□□□□ 0.7
COL15A1P39059 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.42■□□□□ 0.7
COL15A1P39059 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.42■□□□□ 0.7
COL15A1P39059 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.42■□□□□ 0.7
COL15A1P39059 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.42■□□□□ 0.7
COL15A1P39059 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL15A1P39059 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL15A1P39059 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
COL15A1P39059 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL15A1P39059 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL15A1P39059 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL15A1P39059 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.41■□□□□ 0.7
COL15A1P39059 KRT8P4-201ENST00000509735 1454 ntBASIC19.41■□□□□ 0.7
COL15A1P39059 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL15A1P39059 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms