Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V1AP38606 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V1AP38606 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
ATP6V1AP38606 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ATP6V1AP38606 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V1AP38606 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.58■□□□□ 0.73
ATP6V1AP38606 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V1AP38606 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ATP6V1AP38606 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP6V1AP38606 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V1AP38606 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V1AP38606 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V1AP38606 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V1AP38606 ACTG1P2-201ENST00000415776 1125 ntBASIC19.58■□□□□ 0.72
ATP6V1AP38606 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 ACTG1P11-201ENST00000425411 1125 ntBASIC19.58■□□□□ 0.72
ATP6V1AP38606 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 RNMTL1P1-201ENST00000454103 560 ntBASIC19.58■□□□□ 0.72
ATP6V1AP38606 NUP210P1-202ENST00000504322 710 ntBASIC19.58■□□□□ 0.72
ATP6V1AP38606 AC024681.1-201ENST00000521917 487 ntBASIC19.58■□□□□ 0.72
ATP6V1AP38606 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 SAMD11P1-201ENST00000571429 661 ntBASIC19.58■□□□□ 0.72
ATP6V1AP38606 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 AL133499.1-201ENST00000596207 608 ntBASIC19.58■□□□□ 0.72
ATP6V1AP38606 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 AL023803.2-201ENST00000620080 638 ntBASIC19.58■□□□□ 0.72
ATP6V1AP38606 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V1AP38606 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V1AP38606 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V1AP38606 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V1AP38606 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V1AP38606 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP6V1AP38606 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ATP6V1AP38606 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ATP6V1AP38606 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP6V1AP38606 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP6V1AP38606 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ATP6V1AP38606 AL136309.1-201ENST00000403917 691 ntBASIC19.57■□□□□ 0.72
ATP6V1AP38606 FTLP1-201ENST00000449155 526 ntBASIC19.57■□□□□ 0.72
ATP6V1AP38606 EEF1DP6-201ENST00000449232 372 ntBASIC19.57■□□□□ 0.72
ATP6V1AP38606 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.57■□□□□ 0.72
ATP6V1AP38606 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ATP6V1AP38606 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.57■□□□□ 0.72
ATP6V1AP38606 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP6V1AP38606 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ATP6V1AP38606 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP6V1AP38606 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP6V1AP38606 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 CLUHP2-201ENST00000426660 1303 ntBASIC19.56■□□□□ 0.72
ATP6V1AP38606 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 AC011742.3-201ENST00000439053 820 ntBASIC19.56■□□□□ 0.72
ATP6V1AP38606 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 AC004466.1-201ENST00000599515 1080 ntBASIC19.56■□□□□ 0.72
ATP6V1AP38606 AC026740.1-201ENST00000607068 791 ntBASIC19.56■□□□□ 0.72
ATP6V1AP38606 AC138466.3-201ENST00000619983 221 ntBASIC19.56■□□□□ 0.72
ATP6V1AP38606 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP6V1AP38606 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
ATP6V1AP38606 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms