Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CD40LGP29965 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.86□□□□□ -0.19
CD40LGP29965 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.86□□□□□ -0.19
CD40LGP29965 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 AC087641.1-201ENST00000557561 1021 ntBASIC13.86□□□□□ -0.19
CD40LGP29965 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.86□□□□□ -0.19
CD40LGP29965 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.86□□□□□ -0.19
CD40LGP29965 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CD40LGP29965 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.86□□□□□ -0.19
CD40LGP29965 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.86□□□□□ -0.19
CD40LGP29965 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CD40LGP29965 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CD40LGP29965 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.86□□□□□ -0.19
CD40LGP29965 TP73-AS1-210ENST00000637775 1455 ntBASIC13.86□□□□□ -0.19
CD40LGP29965 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CD40LGP29965 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.85□□□□□ -0.19
CD40LGP29965 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
CD40LGP29965 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.85□□□□□ -0.19
CD40LGP29965 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.85□□□□□ -0.19
CD40LGP29965 MIR3180-1-201ENST00000580374 94 ntBASIC13.85□□□□□ -0.19
CD40LGP29965 MIR3180-3-201ENST00000584616 94 ntBASIC13.85□□□□□ -0.19
CD40LGP29965 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.85□□□□□ -0.19
CD40LGP29965 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 AC015818.8-201ENST00000587907 1519 ntBASIC13.85□□□□□ -0.19
CD40LGP29965 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD40LGP29965 AC083964.2-201ENST00000623988 2396 ntBASIC13.85□□□□□ -0.19
CD40LGP29965 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD40LGP29965 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CD40LGP29965 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.84□□□□□ -0.19
CD40LGP29965 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.84□□□□□ -0.19
CD40LGP29965 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.84□□□□□ -0.19
CD40LGP29965 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40LGP29965 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.84□□□□□ -0.19
CD40LGP29965 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40LGP29965 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.84□□□□□ -0.19
CD40LGP29965 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 361.9 ms