Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMLP26374 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMLP26374 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CHMLP26374 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CHMLP26374 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CHMLP26374 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CHMLP26374 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMLP26374 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMLP26374 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 AC106881.1-201ENST00000605849 3329 ntBASIC18.7■□□□□ 0.58
CHMLP26374 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.7■□□□□ 0.58
CHMLP26374 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMLP26374 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMLP26374 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMLP26374 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMLP26374 AC104794.3-201ENST00000566840 1248 ntBASIC18.7■□□□□ 0.58
CHMLP26374 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHMLP26374 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.7■□□□□ 0.58
CHMLP26374 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMLP26374 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMLP26374 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHMLP26374 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMLP26374 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHMLP26374 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMLP26374 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.69■□□□□ 0.58
CHMLP26374 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 AC093214.1-201ENST00000511688 1107 ntBASIC18.69■□□□□ 0.58
CHMLP26374 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.69■□□□□ 0.58
CHMLP26374 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMLP26374 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CHMLP26374 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 FGD5P1-202ENST00000614866 2498 ntBASIC18.69■□□□□ 0.58
CHMLP26374 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMLP26374 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CHMLP26374 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMLP26374 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.69■□□□□ 0.58
CHMLP26374 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHMLP26374 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMLP26374 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMLP26374 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHMLP26374 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMLP26374 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMLP26374 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMLP26374 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMLP26374 BASP1P1-201ENST00000430708 665 ntBASIC18.68■□□□□ 0.58
CHMLP26374 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMLP26374 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.68■□□□□ 0.58
CHMLP26374 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.68■□□□□ 0.58
CHMLP26374 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.68■□□□□ 0.58
CHMLP26374 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMLP26374 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.68■□□□□ 0.58
CHMLP26374 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.68■□□□□ 0.58
CHMLP26374 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms