Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
VAMP1P23763 BTN3A2-202ENST00000377708 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.23□□□□□ -0.29
VAMP1P23763 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.23□□□□□ -0.29
VAMP1P23763 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
VAMP1P23763 AC010327.5-201ENST00000586923 3061 ntBASIC13.23□□□□□ -0.29
VAMP1P23763 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
VAMP1P23763 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 POM121L4P-202ENST00000427789 1891 ntBASIC13.23□□□□□ -0.29
VAMP1P23763 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
VAMP1P23763 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
VAMP1P23763 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 AC093827.2-201ENST00000512654 315 ntBASIC13.22□□□□□ -0.29
VAMP1P23763 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.22□□□□□ -0.29
VAMP1P23763 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.22□□□□□ -0.29
VAMP1P23763 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 MIR4321-201ENST00000592276 80 ntBASIC13.22□□□□□ -0.29
VAMP1P23763 AC006557.2-201ENST00000592985 1240 ntBASIC13.22□□□□□ -0.29
VAMP1P23763 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.22□□□□□ -0.29
VAMP1P23763 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.22□□□□□ -0.29
VAMP1P23763 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VAMP1P23763 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.22□□□□□ -0.29
VAMP1P23763 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
VAMP1P23763 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VAMP1P23763 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.21□□□□□ -0.29
VAMP1P23763 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
VAMP1P23763 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.21□□□□□ -0.29
VAMP1P23763 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms