Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 HYMAI-201ENST00000635591 3347 ntBASIC15.72■□□□□ 0.11
HLA-DPA1P20036 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 AC023157.3-201ENST00000619086 2088 ntBASIC15.72■□□□□ 0.11
HLA-DPA1P20036 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 AC006486.2-201ENST00000624246 2199 ntBASIC15.72■□□□□ 0.11
HLA-DPA1P20036 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPA1P20036 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 SPDYE18-201ENST00000510091 1050 ntBASIC15.71■□□□□ 0.11
HLA-DPA1P20036 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPA1P20036 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DPA1P20036 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
HLA-DPA1P20036 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DPA1P20036 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DPA1P20036 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DPA1P20036 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.7■□□□□ 0.1
HLA-DPA1P20036 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 INGX-202ENST00000489074 768 ntBASIC15.7■□□□□ 0.1
HLA-DPA1P20036 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 AC104794.3-201ENST00000566840 1248 ntBASIC15.7■□□□□ 0.1
HLA-DPA1P20036 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 AL158212.4-201ENST00000624062 1286 ntBASIC15.7■□□□□ 0.1
HLA-DPA1P20036 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 AC011270.2-201ENST00000624293 2550 ntBASIC15.7■□□□□ 0.1
HLA-DPA1P20036 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPA1P20036 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HLA-DPA1P20036 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms