Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NFKB1P19838 FAM8A3P-201ENST00000427218 844 ntBASIC15.83■□□□□ 0.12
NFKB1P19838 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.83■□□□□ 0.12
NFKB1P19838 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.83■□□□□ 0.12
NFKB1P19838 AL589987.1-201ENST00000453380 819 ntBASIC15.83■□□□□ 0.12
NFKB1P19838 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.83■□□□□ 0.12
NFKB1P19838 AC135586.1-201ENST00000539323 574 ntBASIC15.83■□□□□ 0.12
NFKB1P19838 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.83■□□□□ 0.12
NFKB1P19838 TIMM17BP1-201ENST00000545713 516 ntBASIC15.83■□□□□ 0.12
NFKB1P19838 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.83■□□□□ 0.12
NFKB1P19838 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NFKB1P19838 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
NFKB1P19838 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.83■□□□□ 0.12
NFKB1P19838 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NFKB1P19838 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.83■□□□□ 0.12
NFKB1P19838 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NFKB1P19838 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NFKB1P19838 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NFKB1P19838 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NFKB1P19838 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NFKB1P19838 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.82■□□□□ 0.12
NFKB1P19838 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
NFKB1P19838 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NFKB1P19838 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NFKB1P19838 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.82■□□□□ 0.12
NFKB1P19838 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.82■□□□□ 0.12
NFKB1P19838 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.82■□□□□ 0.12
NFKB1P19838 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.82■□□□□ 0.12
NFKB1P19838 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.82■□□□□ 0.12
NFKB1P19838 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NFKB1P19838 AL512638.1-201ENST00000457493 794 ntBASIC15.82■□□□□ 0.12
NFKB1P19838 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
NFKB1P19838 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.82■□□□□ 0.12
NFKB1P19838 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.82■□□□□ 0.12
NFKB1P19838 AC025181.2-201ENST00000606994 802 ntBASIC15.82■□□□□ 0.12
NFKB1P19838 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NFKB1P19838 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NFKB1P19838 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NFKB1P19838 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.82■□□□□ 0.12
NFKB1P19838 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NFKB1P19838 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.82■□□□□ 0.12
NFKB1P19838 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.82■□□□□ 0.12
NFKB1P19838 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.82■□□□□ 0.12
NFKB1P19838 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.82■□□□□ 0.12
NFKB1P19838 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.82■□□□□ 0.12
NFKB1P19838 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NFKB1P19838 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.81■□□□□ 0.12
NFKB1P19838 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NFKB1P19838 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NFKB1P19838 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NFKB1P19838 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NFKB1P19838 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.81■□□□□ 0.12
NFKB1P19838 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NFKB1P19838 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 MRPS18AP1-201ENST00000414458 589 ntBASIC15.81■□□□□ 0.12
NFKB1P19838 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
NFKB1P19838 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.81■□□□□ 0.12
NFKB1P19838 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.81■□□□□ 0.12
NFKB1P19838 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.81■□□□□ 0.12
NFKB1P19838 BASP1P1-201ENST00000430708 665 ntBASIC15.81■□□□□ 0.12
NFKB1P19838 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NFKB1P19838 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NFKB1P19838 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 CYMP-203ENST00000474680 1263 ntBASIC15.81■□□□□ 0.12
NFKB1P19838 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms