Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.34■□□□□ 0.21
PDGFRAP16234 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFRAP16234 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDGFRAP16234 PKD1P5-201ENST00000532415 10291 ntBASIC16.33■□□□□ 0.21
PDGFRAP16234 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PDGFRAP16234 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.33■□□□□ 0.21
PDGFRAP16234 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDGFRAP16234 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
PDGFRAP16234 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
PDGFRAP16234 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDGFRAP16234 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.33■□□□□ 0.2
PDGFRAP16234 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.33■□□□□ 0.2
PDGFRAP16234 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.33■□□□□ 0.2
PDGFRAP16234 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 GNAQP1-201ENST00000444815 1067 ntBASIC16.33■□□□□ 0.2
PDGFRAP16234 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.33■□□□□ 0.2
PDGFRAP16234 AL589987.1-201ENST00000453380 819 ntBASIC16.33■□□□□ 0.2
PDGFRAP16234 MEIS3P1-201ENST00000495167 958 ntBASIC16.33■□□□□ 0.2
PDGFRAP16234 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PDGFRAP16234 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.33■□□□□ 0.2
PDGFRAP16234 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.33■□□□□ 0.2
PDGFRAP16234 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.33■□□□□ 0.2
PDGFRAP16234 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 AC126365.1-201ENST00000578585 1514 ntBASIC16.33■□□□□ 0.2
PDGFRAP16234 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PDGFRAP16234 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.33■□□□□ 0.2
PDGFRAP16234 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.33■□□□□ 0.2
PDGFRAP16234 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.33■□□□□ 0.2
PDGFRAP16234 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFRAP16234 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFRAP16234 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFRAP16234 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFRAP16234 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFRAP16234 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PDGFRAP16234 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFRAP16234 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PDGFRAP16234 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFRAP16234 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PDGFRAP16234 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PDGFRAP16234 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PDGFRAP16234 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFRAP16234 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFRAP16234 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFRAP16234 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFRAP16234 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFRAP16234 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PDGFRAP16234 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.32■□□□□ 0.2
PDGFRAP16234 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFRAP16234 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFRAP16234 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFRAP16234 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PDGFRAP16234 AC004790.1-201ENST00000612686 536 ntBASIC16.32■□□□□ 0.2
PDGFRAP16234 AC148477.4-201ENST00000613430 1793 ntBASIC16.32■□□□□ 0.2
PDGFRAP16234 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFRAP16234 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.32■□□□□ 0.2
PDGFRAP16234 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFRAP16234 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFRAP16234 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PDGFRAP16234 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PDGFRAP16234 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFRAP16234 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFRAP16234 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFRAP16234 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PDGFRAP16234 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFRAP16234 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PDGFRAP16234 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PDGFRAP16234 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PDGFRAP16234 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PDGFRAP16234 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFRAP16234 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFRAP16234 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFRAP16234 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFRAP16234 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms