Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 AC148477.4-201ENST00000613430 1793 ntBASIC13.96□□□□□ -0.17
HLA-DOBP13765 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 SPDYE18-201ENST00000510091 1050 ntBASIC13.96□□□□□ -0.17
HLA-DOBP13765 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 AC008738.7-201ENST00000609744 511 ntBASIC13.96□□□□□ -0.17
HLA-DOBP13765 AC004840.1-201ENST00000636359 365 ntBASIC13.96□□□□□ -0.17
HLA-DOBP13765 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.96□□□□□ -0.17
HLA-DOBP13765 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-DOBP13765 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DOBP13765 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.96□□□□□ -0.18
HLA-DOBP13765 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.96□□□□□ -0.18
HLA-DOBP13765 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DOBP13765 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.96□□□□□ -0.18
HLA-DOBP13765 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.96□□□□□ -0.18
HLA-DOBP13765 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DOBP13765 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.96□□□□□ -0.18
HLA-DOBP13765 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DOBP13765 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DOBP13765 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DOBP13765 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HLA-DOBP13765 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DOBP13765 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-DOBP13765 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms