Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CSN3P07498 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.35□□□□□ -0.43
CSN3P07498 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.35□□□□□ -0.43
CSN3P07498 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.35□□□□□ -0.43
CSN3P07498 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CSN3P07498 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.35□□□□□ -0.43
CSN3P07498 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CSN3P07498 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CSN3P07498 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.35□□□□□ -0.43
CSN3P07498 AC140878.1-201ENST00000565277 250 ntBASIC12.35□□□□□ -0.43
CSN3P07498 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.35□□□□□ -0.43
CSN3P07498 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
CSN3P07498 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.35□□□□□ -0.43
CSN3P07498 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.35□□□□□ -0.43
CSN3P07498 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.35□□□□□ -0.43
CSN3P07498 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 AL592424.1-201ENST00000563624 1536 ntBASIC12.35□□□□□ -0.43
CSN3P07498 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CSN3P07498 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CSN3P07498 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CSN3P07498 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CSN3P07498 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.35□□□□□ -0.43
CSN3P07498 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CSN3P07498 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.35□□□□□ -0.43
CSN3P07498 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CSN3P07498 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CSN3P07498 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.34□□□□□ -0.43
CSN3P07498 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 MIR943-201ENST00000401286 94 ntBASIC12.34□□□□□ -0.43
CSN3P07498 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.34□□□□□ -0.43
CSN3P07498 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CSN3P07498 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.34□□□□□ -0.43
CSN3P07498 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.34□□□□□ -0.43
CSN3P07498 AC069120.2-201ENST00000524091 540 ntBASIC12.34□□□□□ -0.43
CSN3P07498 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.34□□□□□ -0.43
CSN3P07498 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.34□□□□□ -0.43
CSN3P07498 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.34□□□□□ -0.43
CSN3P07498 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.34□□□□□ -0.43
CSN3P07498 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.34□□□□□ -0.43
CSN3P07498 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.34□□□□□ -0.43
CSN3P07498 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CSN3P07498 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CSN3P07498 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CSN3P07498 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.34□□□□□ -0.43
CSN3P07498 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CSN3P07498 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms