Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 AL355306.1-201ENST00000415580 579 ntBASIC14.06□□□□□ -0.16
HLA-DPB1P04440 DNAJB3-201ENST00000446806 729 ntBASIC14.06□□□□□ -0.16
HLA-DPB1P04440 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 RARRES2P8-201ENST00000566335 367 ntBASIC14.06□□□□□ -0.16
HLA-DPB1P04440 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.06□□□□□ -0.16
HLA-DPB1P04440 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 AL589702.1-201ENST00000641229 1509 ntBASIC14.05□□□□□ -0.16
HLA-DPB1P04440 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 CEND1P1-201ENST00000451006 455 ntBASIC14.05□□□□□ -0.16
HLA-DPB1P04440 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 AL135744.1-201ENST00000565098 629 ntBASIC14.05□□□□□ -0.16
HLA-DPB1P04440 AC005829.1-201ENST00000570002 483 ntBASIC14.05□□□□□ -0.16
HLA-DPB1P04440 MIR3687-2-201ENST00000577708 61 ntBASIC14.05□□□□□ -0.16
HLA-DPB1P04440 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 MIR3687-1-201ENST00000614492 61 ntBASIC14.05□□□□□ -0.16
HLA-DPB1P04440 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DPB1P04440 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DPB1P04440 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms