Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.48□□□□□ -0.41
APOC3P02656 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
APOC3P02656 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.48□□□□□ -0.41
APOC3P02656 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC3P02656 TMEM198B-204ENST00000484016 896 ntBASIC12.48□□□□□ -0.41
APOC3P02656 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.48□□□□□ -0.41
APOC3P02656 AC122714.2-201ENST00000502787 707 ntBASIC12.48□□□□□ -0.41
APOC3P02656 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC3P02656 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
APOC3P02656 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.48□□□□□ -0.41
APOC3P02656 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC3P02656 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
APOC3P02656 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 AC092053.3-201ENST00000641308 4975 ntBASIC12.48□□□□□ -0.41
APOC3P02656 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC3P02656 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC3P02656 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.47□□□□□ -0.41
APOC3P02656 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC3P02656 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
APOC3P02656 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 TOP3BP1-201ENST00000420768 1380 ntBASIC12.47□□□□□ -0.41
APOC3P02656 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOC3P02656 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOC3P02656 PEMT-206ENST00000435340 960 ntTSL 5 BASIC12.47□□□□□ -0.41
APOC3P02656 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.47□□□□□ -0.41
APOC3P02656 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
APOC3P02656 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC3P02656 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC3P02656 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.47□□□□□ -0.41
APOC3P02656 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.47□□□□□ -0.41
APOC3P02656 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
APOC3P02656 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC3P02656 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC3P02656 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC3P02656 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
APOC3P02656 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOC3P02656 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 KRT8P24-201ENST00000560290 1559 ntBASIC12.47□□□□□ -0.41
APOC3P02656 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.47□□□□□ -0.41
APOC3P02656 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC3P02656 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOC3P02656 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.47□□□□□ -0.41
APOC3P02656 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 AL353593.2-201ENST00000602529 1483 ntBASIC12.46□□□□□ -0.41
APOC3P02656 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 WASH6P-202ENST00000359512 1437 ntBASIC12.46□□□□□ -0.41
APOC3P02656 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
APOC3P02656 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC3P02656 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
APOC3P02656 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.46□□□□□ -0.41
APOC3P02656 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOC3P02656 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
APOC3P02656 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
APOC3P02656 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms