Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
IFNA1P01562 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 KRT18P38-201ENST00000449496 1282 ntBASIC12.37□□□□□ -0.43
IFNA1P01562 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 SLC25A6P2-201ENST00000497974 877 ntBASIC12.37□□□□□ -0.43
IFNA1P01562 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.37□□□□□ -0.43
IFNA1P01562 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 AC107918.2-201ENST00000530817 355 ntBASIC12.37□□□□□ -0.43
IFNA1P01562 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 AC139887.4-201ENST00000607877 719 ntBASIC12.37□□□□□ -0.43
IFNA1P01562 AC091076.1-201ENST00000610741 619 ntBASIC12.37□□□□□ -0.43
IFNA1P01562 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.37□□□□□ -0.43
IFNA1P01562 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.37□□□□□ -0.43
IFNA1P01562 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
IFNA1P01562 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.37□□□□□ -0.43
IFNA1P01562 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.37□□□□□ -0.43
IFNA1P01562 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.37□□□□□ -0.43
IFNA1P01562 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 AC129492.6-201ENST00000611383 1305 ntBASIC12.37□□□□□ -0.43
IFNA1P01562 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
IFNA1P01562 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.36□□□□□ -0.43
IFNA1P01562 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.36□□□□□ -0.43
IFNA1P01562 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
IFNA1P01562 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.36□□□□□ -0.43
IFNA1P01562 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.36□□□□□ -0.43
IFNA1P01562 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 RCN1P2-201ENST00000398357 915 ntBASIC12.36□□□□□ -0.43
IFNA1P01562 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.36□□□□□ -0.43
IFNA1P01562 ABCD1P5-201ENST00000445663 754 ntBASIC12.36□□□□□ -0.43
IFNA1P01562 AC093724.1-201ENST00000448659 1027 ntBASIC12.36□□□□□ -0.43
IFNA1P01562 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 Z69720.1-201ENST00000601483 472 ntBASIC12.36□□□□□ -0.43
IFNA1P01562 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.36□□□□□ -0.43
IFNA1P01562 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 HYMAI.1-201ENST00000620949 238 ntBASIC12.36□□□□□ -0.43
IFNA1P01562 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
IFNA1P01562 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
IFNA1P01562 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
IFNA1P01562 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
IFNA1P01562 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.36□□□□□ -0.43
IFNA1P01562 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
IFNA1P01562 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
IFNA1P01562 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
IFNA1P01562 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms