Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 AL158212.4-201ENST00000624062 1286 ntBASIC15.3■□□□□ 0.04
CPNE6O95741 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE6O95741 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE6O95741 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE6O95741 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CPNE6O95741 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE6O95741 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE6O95741 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE6O95741 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CPNE6O95741 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE6O95741 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPNE6O95741 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CPNE6O95741 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPNE6O95741 MIR1909-201ENST00000411312 80 ntBASIC15.29■□□□□ 0.04
CPNE6O95741 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE6O95741 TARDBPP1-201ENST00000442013 1203 ntBASIC15.29■□□□□ 0.04
CPNE6O95741 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE6O95741 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE6O95741 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE6O95741 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE6O95741 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE6O95741 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE6O95741 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE6O95741 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE6O95741 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE6O95741 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPNE6O95741 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPNE6O95741 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE6O95741 SNX18-202ENST00000343017 3140 ntBASIC15.29■□□□□ 0.04
CPNE6O95741 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CPNE6O95741 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CPNE6O95741 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE6O95741 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 LINC02447-202ENST00000501888 2146 ntBASIC15.28■□□□□ 0.04
CPNE6O95741 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 MIR658-201ENST00000385210 100 ntBASIC15.28■□□□□ 0.04
CPNE6O95741 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 HAUS4P1-201ENST00000406739 1145 ntBASIC15.28■□□□□ 0.04
CPNE6O95741 AL442647.2-201ENST00000429864 857 ntBASIC15.28■□□□□ 0.04
CPNE6O95741 AC234783.1-201ENST00000441761 496 ntBASIC15.28■□□□□ 0.04
CPNE6O95741 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE6O95741 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE6O95741 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 AC010319.3-201ENST00000597028 470 ntBASIC15.28■□□□□ 0.04
CPNE6O95741 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CPNE6O95741 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.28■□□□□ 0.04
CPNE6O95741 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CPNE6O95741 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE6O95741 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms