Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA1O95477 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
ABCA1O95477 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
ABCA1O95477 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA1O95477 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.1□□□□□ -0.31
ABCA1O95477 RHOXF1P1-202ENST00000635473 501 ntBASIC13.1□□□□□ -0.31
ABCA1O95477 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA1O95477 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ABCA1O95477 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA1O95477 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 YBX1P6-201ENST00000442962 1002 ntBASIC13.1□□□□□ -0.31
ABCA1O95477 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.1□□□□□ -0.31
ABCA1O95477 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA1O95477 AC120045.2-201ENST00000567334 178 ntBASIC13.1□□□□□ -0.31
ABCA1O95477 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.1□□□□□ -0.31
ABCA1O95477 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 AC010328.2-201ENST00000597698 1111 ntBASIC13.1□□□□□ -0.31
ABCA1O95477 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA1O95477 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.1□□□□□ -0.31
ABCA1O95477 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.1□□□□□ -0.31
ABCA1O95477 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ABCA1O95477 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.09□□□□□ -0.31
ABCA1O95477 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
ABCA1O95477 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ABCA1O95477 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.09□□□□□ -0.31
ABCA1O95477 AC067930.6-201ENST00000623257 4947 ntBASIC13.09□□□□□ -0.31
ABCA1O95477 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ABCA1O95477 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 AC134915.1-201ENST00000426461 574 ntBASIC13.09□□□□□ -0.31
ABCA1O95477 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.09□□□□□ -0.31
ABCA1O95477 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.09□□□□□ -0.31
ABCA1O95477 AL359711.2-201ENST00000563105 872 ntBASIC13.09□□□□□ -0.31
ABCA1O95477 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.09□□□□□ -0.31
ABCA1O95477 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.09□□□□□ -0.31
ABCA1O95477 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.09□□□□□ -0.31
ABCA1O95477 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.09□□□□□ -0.31
ABCA1O95477 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.09□□□□□ -0.31
ABCA1O95477 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ABCA1O95477 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.09□□□□□ -0.31
ABCA1O95477 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms