Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LTN1O94822 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTN1O94822 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTN1O94822 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
LTN1O94822 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTN1O94822 AC003102.2-201ENST00000589195 1469 ntBASIC20.09■□□□□ 0.81
LTN1O94822 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.09■□□□□ 0.81
LTN1O94822 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTN1O94822 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTN1O94822 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC20.09■□□□□ 0.81
LTN1O94822 AC011742.3-201ENST00000439053 820 ntBASIC20.09■□□□□ 0.81
LTN1O94822 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTN1O94822 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
LTN1O94822 MEG3_2.1-201ENST00000611456 105 ntBASIC20.09■□□□□ 0.81
LTN1O94822 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.09■□□□□ 0.81
LTN1O94822 AC092850.2-201ENST00000623821 2697 ntBASIC20.09■□□□□ 0.81
LTN1O94822 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTN1O94822 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
LTN1O94822 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.09■□□□□ 0.81
LTN1O94822 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LTN1O94822 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTN1O94822 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.09■□□□□ 0.81
LTN1O94822 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
LTN1O94822 AP005117.1-202ENST00000581724 1908 ntBASIC20.09■□□□□ 0.81
LTN1O94822 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LTN1O94822 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LTN1O94822 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LTN1O94822 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC20.08■□□□□ 0.81
LTN1O94822 AC073150.1-201ENST00000450406 1084 ntBASIC20.08■□□□□ 0.81
LTN1O94822 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC20.08■□□□□ 0.81
LTN1O94822 ALG3P1-201ENST00000508806 1114 ntBASIC20.08■□□□□ 0.81
LTN1O94822 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LTN1O94822 SNX1-214ENST00000625244 324 ntTSL 5 BASIC20.08■□□□□ 0.81
LTN1O94822 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LTN1O94822 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LTN1O94822 FAM90A7P-201ENST00000382628 1395 ntBASIC20.08■□□□□ 0.81
LTN1O94822 FAM90A23P-201ENST00000400136 1395 ntBASIC20.08■□□□□ 0.81
LTN1O94822 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LTN1O94822 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LTN1O94822 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LTN1O94822 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
LTN1O94822 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LTN1O94822 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC20.08■□□□□ 0.8
LTN1O94822 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
LTN1O94822 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
LTN1O94822 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LTN1O94822 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LTN1O94822 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.08■□□□□ 0.8
LTN1O94822 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LTN1O94822 RN7SKP214-201ENST00000364208 315 ntBASIC20.08■□□□□ 0.8
LTN1O94822 KLF2P1-201ENST00000447438 1042 ntBASIC20.08■□□□□ 0.8
LTN1O94822 AC012618.1-201ENST00000461223 412 ntBASIC20.08■□□□□ 0.8
LTN1O94822 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
LTN1O94822 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
LTN1O94822 RPL35-206ENST00000629845 340 ntTSL 5 BASIC20.08■□□□□ 0.8
LTN1O94822 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LTN1O94822 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LTN1O94822 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
LTN1O94822 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
LTN1O94822 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.07■□□□□ 0.8
LTN1O94822 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC20.07■□□□□ 0.8
LTN1O94822 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.07■□□□□ 0.8
LTN1O94822 AP000845.1-201ENST00000581677 2131 ntBASIC20.07■□□□□ 0.8
LTN1O94822 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.07■□□□□ 0.8
LTN1O94822 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC20.07■□□□□ 0.8
LTN1O94822 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
LTN1O94822 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
LTN1O94822 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.07■□□□□ 0.8
LTN1O94822 PRKXP1-201ENST00000561423 1122 ntBASIC20.07■□□□□ 0.8
LTN1O94822 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.07■□□□□ 0.8
LTN1O94822 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC20.07■□□□□ 0.8
LTN1O94822 AL157813.1-201ENST00000612996 587 ntBASIC20.07■□□□□ 0.8
LTN1O94822 AL391005.1-201ENST00000623953 2435 ntBASIC20.07■□□□□ 0.8
LTN1O94822 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
LTN1O94822 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 KRT8P21-201ENST00000430398 1491 ntBASIC20.07■□□□□ 0.8
LTN1O94822 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.07■□□□□ 0.8
LTN1O94822 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LTN1O94822 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LTN1O94822 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.06■□□□□ 0.8
LTN1O94822 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LTN1O94822 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LTN1O94822 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LTN1O94822 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LTN1O94822 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms