Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.02□□□□□ -0.01
CPNE3O75131 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.02□□□□□ -0.01
CPNE3O75131 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CPNE3O75131 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CPNE3O75131 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.02□□□□□ -0.01
CPNE3O75131 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.02□□□□□ -0.01
CPNE3O75131 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.02□□□□□ -0.01
CPNE3O75131 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 REXO1L1P-202ENST00000608646 1974 ntBASIC15.02□□□□□ -0.01
CPNE3O75131 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CPNE3O75131 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 AC074338.1-201ENST00000416825 156 ntBASIC15.01□□□□□ -0.01
CPNE3O75131 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.01□□□□□ -0.01
CPNE3O75131 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 AC007389.4-201ENST00000454674 793 ntBASIC15.01□□□□□ -0.01
CPNE3O75131 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.01□□□□□ -0.01
CPNE3O75131 SLED1-202ENST00000512051 380 ntBASIC15.01□□□□□ -0.01
CPNE3O75131 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.01□□□□□ -0.01
CPNE3O75131 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.01□□□□□ -0.01
CPNE3O75131 AC092552.1-201ENST00000547243 906 ntBASIC15.01□□□□□ -0.01
CPNE3O75131 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.01□□□□□ -0.01
CPNE3O75131 AC106886.1-201ENST00000568660 600 ntBASIC15.01□□□□□ -0.01
CPNE3O75131 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.01□□□□□ -0.01
CPNE3O75131 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 AL033527.5-201ENST00000641382 801 ntBASIC15.01□□□□□ -0.01
CPNE3O75131 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.01□□□□□ -0.01
CPNE3O75131 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CPNE3O75131 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.01□□□□□ -0.01
CPNE3O75131 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15□□□□□ -0.01
CPNE3O75131 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE3O75131 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15□□□□□ -0.01
CPNE3O75131 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15□□□□□ -0.01
CPNE3O75131 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE3O75131 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE3O75131 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE3O75131 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CPNE3O75131 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
CPNE3O75131 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPNE3O75131 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15□□□□□ -0.01
CPNE3O75131 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15□□□□□ -0.01
CPNE3O75131 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CPNE3O75131 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15□□□□□ -0.01
CPNE3O75131 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15□□□□□ -0.01
CPNE3O75131 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15□□□□□ -0.01
CPNE3O75131 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15□□□□□ -0.01
CPNE3O75131 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15□□□□□ -0.01
CPNE3O75131 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15□□□□□ -0.01
CPNE3O75131 USP40-206ENST00000443711 628 ntTSL 2 BASIC15□□□□□ -0.01
CPNE3O75131 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms