Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 AC148477.4-201ENST00000613430 1793 ntBASIC15.7■□□□□ 0.1
KDELR3O43731 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.7■□□□□ 0.1
KDELR3O43731 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.7■□□□□ 0.1
KDELR3O43731 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.7■□□□□ 0.1
KDELR3O43731 ACKR1-201ENST00000368121 1240 ntBASIC15.7■□□□□ 0.1
KDELR3O43731 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
KDELR3O43731 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.7■□□□□ 0.1
KDELR3O43731 KRT17P7-201ENST00000451704 1104 ntBASIC15.7■□□□□ 0.1
KDELR3O43731 AC007389.4-201ENST00000454674 793 ntBASIC15.7■□□□□ 0.1
KDELR3O43731 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.7■□□□□ 0.1
KDELR3O43731 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.7■□□□□ 0.1
KDELR3O43731 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KDELR3O43731 AP001063.1-201ENST00000568332 529 ntBASIC15.7■□□□□ 0.1
KDELR3O43731 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.7■□□□□ 0.1
KDELR3O43731 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
KDELR3O43731 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.7■□□□□ 0.1
KDELR3O43731 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.7■□□□□ 0.1
KDELR3O43731 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.7■□□□□ 0.1
KDELR3O43731 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.7■□□□□ 0.1
KDELR3O43731 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KDELR3O43731 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
KDELR3O43731 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
KDELR3O43731 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.69■□□□□ 0.1
KDELR3O43731 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.69■□□□□ 0.1
KDELR3O43731 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.69■□□□□ 0.1
KDELR3O43731 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 CICP6-201ENST00000457191 2729 ntBASIC15.69■□□□□ 0.1
KDELR3O43731 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.69■□□□□ 0.1
KDELR3O43731 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
KDELR3O43731 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KDELR3O43731 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.69■□□□□ 0.1
KDELR3O43731 AL645937.2-201ENST00000396808 931 ntBASIC15.69■□□□□ 0.1
KDELR3O43731 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.69■□□□□ 0.1
KDELR3O43731 NUS1P3-201ENST00000423502 862 ntBASIC15.69■□□□□ 0.1
KDELR3O43731 AC005034.1-201ENST00000426657 489 ntBASIC15.69■□□□□ 0.1
KDELR3O43731 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.69■□□□□ 0.1
KDELR3O43731 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.69■□□□□ 0.1
KDELR3O43731 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
KDELR3O43731 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.69■□□□□ 0.1
KDELR3O43731 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.69■□□□□ 0.1
KDELR3O43731 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.69■□□□□ 0.1
KDELR3O43731 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.69■□□□□ 0.1
KDELR3O43731 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.69■□□□□ 0.1
KDELR3O43731 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
KDELR3O43731 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.69■□□□□ 0.1
KDELR3O43731 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.69■□□□□ 0.1
KDELR3O43731 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KDELR3O43731 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KDELR3O43731 AC063926.2-201ENST00000623766 1308 ntBASIC15.68■□□□□ 0.1
KDELR3O43731 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.68■□□□□ 0.1
KDELR3O43731 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KDELR3O43731 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KDELR3O43731 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.68■□□□□ 0.1
KDELR3O43731 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KDELR3O43731 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.68■□□□□ 0.1
KDELR3O43731 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KDELR3O43731 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.68■□□□□ 0.1
KDELR3O43731 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KDELR3O43731 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KDELR3O43731 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KDELR3O43731 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KDELR3O43731 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
KDELR3O43731 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
KDELR3O43731 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.68■□□□□ 0.1
KDELR3O43731 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KDELR3O43731 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms