Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.92□□□□□ -0.02
PDLIM1O00151 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM1O00151 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.92□□□□□ -0.02
PDLIM1O00151 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM1O00151 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PDLIM1O00151 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM1O00151 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.92□□□□□ -0.02
PDLIM1O00151 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM1O00151 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PDLIM1O00151 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM1O00151 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM1O00151 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM1O00151 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PDLIM1O00151 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM1O00151 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM1O00151 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PDLIM1O00151 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.91□□□□□ -0.02
PDLIM1O00151 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.91□□□□□ -0.02
PDLIM1O00151 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM1O00151 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM1O00151 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.91□□□□□ -0.02
PDLIM1O00151 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM1O00151 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.91□□□□□ -0.02
PDLIM1O00151 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PDLIM1O00151 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM1O00151 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM1O00151 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PDLIM1O00151 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.91□□□□□ -0.02
PDLIM1O00151 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PDLIM1O00151 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.9□□□□□ -0.02
PDLIM1O00151 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
PDLIM1O00151 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
PDLIM1O00151 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
PDLIM1O00151 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.9□□□□□ -0.02
PDLIM1O00151 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
PDLIM1O00151 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.9□□□□□ -0.02
PDLIM1O00151 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.9□□□□□ -0.02
PDLIM1O00151 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.9□□□□□ -0.02
PDLIM1O00151 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PDLIM1O00151 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PDLIM1O00151 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.9□□□□□ -0.02
PDLIM1O00151 AC018845.2-201ENST00000568326 409 ntBASIC14.9□□□□□ -0.02
PDLIM1O00151 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.9□□□□□ -0.02
PDLIM1O00151 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.9□□□□□ -0.02
PDLIM1O00151 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.9□□□□□ -0.02
PDLIM1O00151 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
PDLIM1O00151 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 PPT1-213ENST00000641319 2388 ntBASIC14.9□□□□□ -0.02
PDLIM1O00151 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PDLIM1O00151 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
PDLIM1O00151 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDLIM1O00151 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PDLIM1O00151 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM1O00151 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM1O00151 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDLIM1O00151 AL359881.3-201ENST00000602640 1721 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms