Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 USP32P1-208ENST00000506594 1164 ntBASIC17.46■□□□□ 0.39
DDX39AO00148 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
DDX39AO00148 IGHV3-71-201ENST00000523324 359 ntBASIC17.46■□□□□ 0.39
DDX39AO00148 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.46■□□□□ 0.39
DDX39AO00148 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.46■□□□□ 0.39
DDX39AO00148 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.46■□□□□ 0.39
DDX39AO00148 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.46■□□□□ 0.39
DDX39AO00148 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
DDX39AO00148 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.46■□□□□ 0.39
DDX39AO00148 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.46■□□□□ 0.39
DDX39AO00148 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX39AO00148 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
DDX39AO00148 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
DDX39AO00148 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
DDX39AO00148 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
DDX39AO00148 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
DDX39AO00148 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.46■□□□□ 0.38
DDX39AO00148 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX39AO00148 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 AC018665.1-201ENST00000622927 1362 ntBASIC17.45■□□□□ 0.38
DDX39AO00148 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DDX39AO00148 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
DDX39AO00148 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.45■□□□□ 0.38
DDX39AO00148 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 AC079776.1-201ENST00000401540 1152 ntBASIC17.45■□□□□ 0.38
DDX39AO00148 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX39AO00148 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX39AO00148 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX39AO00148 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX39AO00148 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
DDX39AO00148 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.45■□□□□ 0.38
DDX39AO00148 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX39AO00148 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX39AO00148 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX39AO00148 RAB43P1-201ENST00000561790 589 ntBASIC17.45■□□□□ 0.38
DDX39AO00148 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DDX39AO00148 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX39AO00148 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.45■□□□□ 0.38
DDX39AO00148 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
DDX39AO00148 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
DDX39AO00148 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX39AO00148 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX39AO00148 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
DDX39AO00148 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.44■□□□□ 0.38
DDX39AO00148 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX39AO00148 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX39AO00148 ARSEP1-201ENST00000420443 635 ntBASIC17.44■□□□□ 0.38
DDX39AO00148 ATP5G2P4-201ENST00000442175 420 ntBASIC17.44■□□□□ 0.38
DDX39AO00148 ACA64.2-201ENST00000459014 129 ntBASIC17.44■□□□□ 0.38
DDX39AO00148 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX39AO00148 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.44■□□□□ 0.38
DDX39AO00148 SLC25A47P1-201ENST00000531577 414 ntBASIC17.44■□□□□ 0.38
DDX39AO00148 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX39AO00148 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
DDX39AO00148 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX39AO00148 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.44■□□□□ 0.38
DDX39AO00148 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.44■□□□□ 0.38
DDX39AO00148 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms