Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 AC007292.2-201ENST00000593524 1812 ntBASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 AL080243.2-201ENST00000418783 582 ntBASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TARDBPP1-201ENST00000442013 1203 ntBASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 Z92544.3-201ENST00000624747 417 ntBASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 AL033527.5-202ENST00000641632 1098 ntBASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 TUBB3P1-201ENST00000405796 1332 ntBASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGA11Q9Y5H2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 FO538757.1-201ENST00000623083 1397 ntBASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 AC112693.3-201ENST00000624819 1983 ntBASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 AL139400.1-201ENST00000366220 510 ntBASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 RPL37AP1-201ENST00000412502 279 ntBASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 AC098799.1-201ENST00000504752 800 ntBASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 AC015911.4-201ENST00000588022 1070 ntBASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA11Q9Y5H2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 C18orf15-201ENST00000623680 2534 ntBASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA11Q9Y5H2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms