Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 AC108073.2-201ENST00000464002 357 ntBASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 AC117489.1-201ENST00000625169 3217 ntBASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGB1Q9Y5G3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGB1Q9Y5G3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
PCDHGB1Q9Y5G3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGB1Q9Y5G3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
PCDHGB1Q9Y5G3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGB1Q9Y5G3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGB1Q9Y5G3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGB1Q9Y5G3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGB1Q9Y5G3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 PMS2P2-201ENST00000425039 1128 ntBASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 AC098831.1-202ENST00000438821 336 ntBASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 AC010327.4-202ENST00000591484 748 ntBASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 AC015656.1-201ENST00000624209 3578 ntBASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGB1Q9Y5G3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDHGB1Q9Y5G3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms