Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 AC023908.3-201ENST00000564211 3047 ntBASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 AC106881.1-201ENST00000605849 3329 ntBASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 AC026150.2-201ENST00000564693 1156 ntBASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 AC105021.1-202ENST00000570572 669 ntBASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RHBDD3Q9Y3P4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 SPDYE14P-201ENST00000442619 822 ntBASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 AC023141.5-201ENST00000458585 616 ntBASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 AL450472.2-201ENST00000603663 1156 ntBASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 AC009093.7-201ENST00000623853 1223 ntBASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 LINC00528-201ENST00000600723 2160 ntBASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RHBDD3Q9Y3P4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RHBDD3Q9Y3P4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms