Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 RNF216P1-203ENST00000404404 2427 ntBASIC15.4■□□□□ 0.06
NCDNQ9UBB6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 AL603756.1-201ENST00000606511 2163 ntBASIC15.4■□□□□ 0.06
NCDNQ9UBB6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NCDNQ9UBB6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
NCDNQ9UBB6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 AC011742.3-201ENST00000439053 820 ntBASIC15.39■□□□□ 0.05
NCDNQ9UBB6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 AC018635.2-201ENST00000608625 364 ntBASIC15.39■□□□□ 0.05
NCDNQ9UBB6 RN7SL736P-201ENST00000613111 269 ntBASIC15.39■□□□□ 0.05
NCDNQ9UBB6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCDNQ9UBB6 TUBBP5-203ENST00000508529 1334 ntBASIC15.39■□□□□ 0.05
NCDNQ9UBB6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 AC078925.2-201ENST00000624013 1973 ntBASIC15.38■□□□□ 0.05
NCDNQ9UBB6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 AC005740.2-201ENST00000511085 419 ntBASIC15.38■□□□□ 0.05
NCDNQ9UBB6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 AC024681.1-201ENST00000521917 487 ntBASIC15.38■□□□□ 0.05
NCDNQ9UBB6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 COX6A1P2-201ENST00000620597 330 ntBASIC15.38■□□□□ 0.05
NCDNQ9UBB6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NCDNQ9UBB6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 410 ms